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Papers

FPGA

RIFFA

RIFFA_A_Reusable_Integration_Framework_for_FPGA_Accelerators url

https://kastner.ucsd.edu/wp-content/uploads/2014/04/admin/fpl-riffa2.pdf url


USB3 FIFO Interface for DAQ use FT60X and Cypress FX3

USB3 FIFO Interface for DAQ


Intan RHX

Intan ADC Missing Code and Missing Decison Level (local pdf)

Fix SAR ADC Issues (local pdf)


Neuro Science Experiement

Falcon

Falcon Core doc Falcon Core

Falcon Paper


ReptiLearn

ReptiLearn: An automated home cage system for behavioral experiments in reptiles without human intervention Paper url or Local Pdf

reptiLearn github url

PreyTouch

PreyTouch: a touchscreen-based closed-loop system for studying predator-prey interactions url

PreyTouch: a touchscreen-based closed-loop system for studying predator-prey interactions local pdf

PreyTouch Github

Overall latency


Syntalos

Syntalos

Syntalos Github

Syntalos: a software for precise synchronization of simultaneous multi- modal data acquisition and closed-loop interventions

Supplementary Information

Experiment Directory Layout

The Experiment Directory Layout (EDL) is a specification for a storage layout for data from
scientific experiments, with primary focus on neuroscientific data. It was originally
developed for the Syntalos DAQ system, but can be used elsewhere.

Star Protocol

Star Protocol

Protocol for precise signal synchronization of
electrophysiology, videography, and audio
recordings using a custom-made pulse
generator

Any-Maze

any-maze


Open Ephys Close Loop

Open_Ephys_electroencephalography_Open_Ephys_EEG_A_modular_low-cost_open-source_solution_to_human_neural_recording Paper url

Wearable_EEG_electronics_for_a_Brain-AI_Closed-Loop_System_to_enhance_autonomous_machine_decision-making Paper url

Open Ephys Close Loop Calculation


Brain

How are Concepts Created in the Brain? url

The log-dynamic brain: How skewed distributions affect network operations (local pdf)


System Model and Simulation

PySD: System Dynamics Modeling in Python

PySD: System Dynamics Modeling in Python